BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A03LP1|AL426617
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig714 1283 0.0
>3x_Contig714
Length = 3655
Score = 1283 bits (647), Expect = 0.0
Identities = 647/647 (100%)
Strand = Plus / Minus
Query: 1 tcaagtgagttctaatatcagaaaaggattgtcaaagggaacgtatacccacttaattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tcaagtgagttctaatatcagaaaaggattgtcaaagggaacgtatacccacttaattct 588
Query: 61 tcgaatataaacagcgatggctaataccgtgggaggtgtgctttcgggggtcaatccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tcgaatataaacagcgatggctaataccgtgggaggtgtgctttcgggggtcaatccttt 528
Query: 121 catatataactctggttcaccaataacgtttttccttattcaagcagcgttaattctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 catatataactctggttcaccaataacgtttttccttattcaagcagcgttaattctagt 468
Query: 181 acttacgaatgttttgcatgtgtttatttcgaaacttaggcaaccgaaagttatctctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 acttacgaatgttttgcatgtgtttatttcgaaacttaggcaaccgaaagttatctctga 408
Query: 241 ggttattgcaggtatcatactagggcctaccgtgtttggacagatcccaaattatctcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggttattgcaggtatcatactagggcctaccgtgtttggacagatcccaaattatctcac 348
Query: 301 aaccattttccctgctggctcagtgactggtttgaaccttgtagctaatttgggaatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaccattttccctgctggctcagtgactggtttgaaccttgtagctaatttgggaatcat 288
Query: 361 tttgttcatgtttttcttggggatggaagtcgatattagcttcgtgaagagaaatgccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttgttcatgtttttcttggggatggaagtcgatattagcttcgtgaagagaaatgccaa 228
Query: 421 ggcagctatctcgattggattggcgacgttaattgtaccattcgggtttgggtgtttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggcagctatctcgattggattggcgacgttaattgtaccattcgggtttgggtgtttgtt 168
Query: 481 tgcattacccttatataatgcttatatggacggacatggtattgaattcaaagtctttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tgcattacccttatataatgcttatatggacggacatggtattgaattcaaagtctttat 108
Query: 541 ggtattcattgccgtttctctatcgattacggcttttccagtcttgtgtcgtattcttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ggtattcattgccgtttctctatcgattacggcttttccagtcttgtgtcgtattcttac 48
Query: 601 cgagttgagattggtgaaagaaagagtaggtatcattgttttgactt 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 cgagttgagattggtgaaagaaagagtaggtatcattgttttgactt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5141
Number of Sequences: 1807
Number of extensions: 5141
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)